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Table 1 The probabilities (relative frequencies) for the production rules of the SCFG Ĝ sto obtained by training it using our biological database

From: Random generation of RNA secondary structures according to native distributions

Nonterminal Nt Probabilities of Rules with Premise Nt
S' p ^ 1 :=1
E p ^ 2 := 137 6476 , p ^ 3 := 6339 6476 ,
S p ^ 4 := 177 12952 , p ^ 5 := 12775 12952 ,
T p ^ 6 := 11086 12775 , p ^ 7 := 1689 12775 ,
C p ^ 8 : = 14367 148978 , p ^ 9 : = 134611 148978 ,
A p ^ 10 :=1,
L p ^ 11 : = 605069 792975 , p ^ 12 : = 31912 792975 , p ^ 13 : = 4912 264325 , p ^ 14 : = 5821 158595 ,
  p ^ 15 : = 1893 264325 , p ^ 16 : = 2723 31719 , p ^ 17 : = 38399 792975 ,
G p ^ 18 : = 11667 38399 , p ^ 19 : = 7235 38399 , p ^ 20 : = 11831 38399 , p ^ 21 : = 7666 38399 ,
D p ^ 22 :=1,
B p ^ 23 : = 4967 12748 , p ^ 24 : = 7781 12748 ,
F p ^ 25 : = 3912 68075 , p ^ 26 : = 23208 68075 , p ^ 27 : = 8191 13615 ,
H p ^ 28 : = 8191 40700 , p ^ 29 : = 32509 40700 ,
P p ^ 30 : = 533 4912 , p ^ 31 : = 1053 4912 , p ^ 32 : = 2963 14736 , p ^ 33 : = 7015 14736 ,
Q p ^ 34 : = 4986 29105 , p ^ 35 : = 24119 29105 ,
R p ^ 36 : = 2357 5679 , p ^ 37 : = 3322 5679 ,
V p ^ 38 : = 1 ,
W p ^ 39 : = 1 ,
O p ^ 40 : = 1 ,
J p ^ 41 : = 27441 84620 , p ^ 42 : = 57179 84620 ,
K p ^ 43 : = 15731 53725 , p ^ 44 : = 37994 53725 ,
M p ^ 45 :=1,
X p ^ 46 : = 6196 87035 , p ^ 47 : = 80839 87035 ,
Y p ^ 48 :=1,
Z p ^ 49 : = 2812 55123 , p ^ 50 : = 52311 55123 ,
N p ^ 51 : = 7737 17437 , p ^ 52 : = 9700 17437 ,
U p ^ 53 : = 109939 518817 , p ^ 54 : = 408878 518817 ,
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Algorithms for Molecular Biology

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